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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs79904324 chr10:81804688 A/G 0.00025 489 16.2 15.83 11.73 KM Plot
THCA rs79925087 chr1:220741199 C/T 2.55E-5 488 15.9 16.63 17.17 KM Plot
THCA rs79927900 chr9:95850053 C/T 2.11E-6 487 15.7 17.63 16.57 KM Plot
THCA rs79955416 chr6:24408905 C/G 4.77E-15 489 16.38 14.85 11.07 KM Plot
THCA rs79973454 chr6:24418835 T/TG 5.33E-15 489 16.33 14.85 11.07 KM Plot
THCA rs79979345 chr6:24407205 T/A 4.55E-15 490 16.38 14.8 11.07 KM Plot
THCA rs79983496 chr11:62588128 C/G 8.02E-5 488 16.23 14.17 14.27 KM Plot
THCA rs80014275 chr3:73036457 TA/T 9.12E-8 473 16.48 14.67 14.48 KM Plot
THCA rs80020194 chr10:105035954 A/G 1.83E-7 482 15.3 17.93 21.13 KM Plot
THCA rs8003102 chr14:24826154 T/C 7.41E-6 480 16.27 15.17 14.7 KM Plot
THCA rs80068245 chr6:24427448 G/A 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs8008481 chr14:36084812 T/G 5.57E-6 484 15.93 16.35 8.33 KM Plot
THCA rs80107327 chr7:43977134 C/G 5.2E-5 473 16.33 13.65 17.03 KM Plot
THCA rs8011238 chr14:23223562 G/A 1.57E-9 488 15.32 17.05 19.02 KM Plot
THCA rs8012321 chr14:23223429 C/T 1.57E-9 488 15.32 17.05 19.02 KM Plot